2014
DOI: 10.1073/pnas.1401598111
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Transcriptional divergence and conservation of human and mouse erythropoiesis

Abstract: Significance Mouse models have been instrumental in advancing our understanding of blood cell production. Although many studies have suggested specific differences between human and mouse red cell production (erythropoiesis), a global study of such similarities and differences has been lacking. By computationally comparing global gene expression data from adult human and mouse erythroid precursors representing the distinct stages of maturation, we showed that, while the overall transcriptional landsc… Show more

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Cited by 73 publications
(84 citation statements)
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“…7G). Although differentiating G1-ER cells demonstrate significant overlap in gene expression with primary erythroblasts (38)(39)(40), these cells do not undergo efficient enucleation. However, G1-ER cells undergo nuclear condensation and polarization and form CARs during differentiation.…”
Section: Fig 6 E2f-2 Regulates Nuclear Condensation During Erythroid mentioning
confidence: 96%
“…7G). Although differentiating G1-ER cells demonstrate significant overlap in gene expression with primary erythroblasts (38)(39)(40), these cells do not undergo efficient enucleation. However, G1-ER cells undergo nuclear condensation and polarization and form CARs during differentiation.…”
Section: Fig 6 E2f-2 Regulates Nuclear Condensation During Erythroid mentioning
confidence: 96%
“…While an incredible amount of knowledge on hematopoiesis has been gained from studies on model organisms (3), recent work has shown that there is at least some divergence both at that level of specific molecules and more globally at a genomic level when comparing blood cell production in humans with that observed in mice (6)(7)(8)(9)(10). For example, mice with mutations in Sec23b, whose orthologue is known to cause congenital dyserythropoietic anemia type II in humans, have completely normal blood counts and ostensibly normal red blood cell production (erythropoiesis) (11)(12)(13).…”
mentioning
confidence: 99%
“…In addition, there has also been an inability to develop faithful models for other congenital forms of anemia, such as Diamond-Blackfan anemia, which is characterized by a paucity of the earliest identifiable erythroid precursors with a reduction in erythroid-committed progenitors as well (14). At the genomic level, gene expression and histone modifications show global divergence at comparable stages of mouse and human erythropoiesis (6)(7)(8)10). Some of this divergence seems to be mediated by alteration in the binding of key transcription factors between species (10), which is similar to what has been noted in other tissues and cell types (15).…”
mentioning
confidence: 99%
“…Moreover, recent studies have revealed the distinct differences between mice and humans from proximal and distal regulatory elements to TF landscape Monaco et al, 2015;Pishesha et al, 2014;Shay et al, 2013). In particular, only ~30% of the top 500 human expressed genes have equivalent orthologous in the top 500 expressed genes in stage-matched mouse erythroid cells (Pishesha et al, 2014).…”
Section: Discussionmentioning
confidence: 99%
“…In particular, only ~30% of the top 500 human expressed genes have equivalent orthologous in the top 500 expressed genes in stage-matched mouse erythroid cells (Pishesha et al, 2014). Moreover, these studies have demonstrated that while promoter regions generally demonstrate high interspecies fidelity, promoter sequences with less than 65% conservation show little correlation to gene expression levels across species Pishesha et al, 2014), suggesting diverse TF regulation and promoter usage in different species. These variations in the control of gene transcription might contribute to important physiological differences between mice and humans.…”
Section: Discussionmentioning
confidence: 99%